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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs61324340 chr12:48774940 T/C COL2A1 chr12:48366748-48398269:- 1.26 5.13 4.4E-6 Box Plot
ACC rs61487711 chr7:72231028 T/C TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs61521894 chr12:53007046 C/T AMHR2 chr12:53817639-53825318:+ 0.73 5.16 3.99E-6 Box Plot
ACC rs61544983 chr20:44362784 T/TAA WFDC3 chr20:44376583-44420571:- 0.82 5.98 2.06E-7 Box Plot
ACC rs616540 chr1:245196409 A/G EFCAB2 chr1:245133007-245290466:+ 0.65 5.84 3.39E-7 Box Plot
ACC rs61734374 chr11:74457056 A/G XRRA1 chr11:74518784-74660245:- 0.69 5.23 3.04E-6 Box Plot
ACC rs61739170 chr3:93780109 G/C STX19 chr3:93733213-93747454:- 0.77 6.23 8.43E-8 Box Plot
ACC rs61894779 chr11:74514603 C/T XRRA1 chr11:74518784-74660245:- 0.74 5.56 9.58E-7 Box Plot
ACC rs62005063 chr14:74455979 C/T LIN52 chr14:74551499-74667938:+ 0.59 6.23 8.25E-8 Box Plot
ACC rs62005064 chr14:74456128 C/T LIN52 chr14:74551499-74667938:+ 0.59 6.23 8.25E-8 Box Plot
ACC rs62005067 chr14:74458663 T/C LIN52 chr14:74551499-74667938:+ 0.59 6.23 8.25E-8 Box Plot
ACC rs62065481 chr17:63004391 C/G AMZ2P1 chr17:62962668-62971694:- 0.86 5.39 1.76E-6 Box Plot
ACC rs62073261 chr17:62973719 G/A AMZ2P1 chr17:62962668-62971694:- 1.03 5.05 5.82E-6 Box Plot
ACC rs62073271 chr17:62979574 A/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs62073272 chr17:62979614 T/C AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot